That is the preallocation of the oplog which is required for replica set operation.
http://docs.mongodb.org/manual/core/replica-set-oplog/
For 64-bit Linux, Solaris, FreeBSD, and Windows systems, MongoDB allocates 5% of the available free disk space, but will always allocate at least 1 gigabyte and never more than 50 gigabytes.
Thanks for the info, Daniel.
If you specify --oplogSize XXX <- number in Megabytes how big the oplog should be.
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